Leveraging Modularity During Replication of High-Fidelity Models: Lessons from Replicating an Agent-Based Model for HIV Prevention
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by
Wouter Vermeer, Arthur Hjorth, Samuel M. Jenness, C Hendrick Brown, Uri Wilensky
References
NOTE: currently batch computed and may include additional references sources, or be missing recent changes, compared to entity reference list.Showing 1 - 30 of 58 references (in 81ms) | ||
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[b0] via fuzzy |
Verification & validation by docking: a case study of agent-based models of Anopheles gambiae
S. M. Niaz Arifin, Gregory J. Davis, Ying Zhou 2010 Summer Simulation Multiconference dblp:conf/scsc/ArifinDZ10 | |
[b1] via grobid |
Society for Computer Simulation International
| |
[b2] via grobid |
Axtell, R., Axelrod, R., Epstein, J. M. & Cohen, M. D. ( ). Aligning simulation models: A case study and results. Computational and Mathematical Organization Theory, ( ), -
| |
[b3] via grobid |
Axtell, R., Epstein, J. M., Dean, J. S., Gumerman, G. J., Swedlund, A. C., Harburger, J., Chakravarty, S., Ham- mond, R., Parker, J. & Parker, M. ( ). Population growth and collapse in a multiagent model of the Kayenta Anasazi in Long House Valley. Proceedings of the National Academy of Sciences of the United States of America, ( ), -
| |
[b4] via fuzzy |
Adaptive Agents, Political Institutions and Civic Traditions in Modern Italy
Ravi Bhavnani 2003 Journal of Artificial Societies and Social Simulation dblp:journals/jasss/Bhavnani03 | |
[b5] via grobid |
Bonabeau, E. ( ). Agent-based modeling: Methods and techniques for simulating human systems. Proceed- ings of the National Academy of Sciences of the United States of America, ( ), - CDC ( ). Preexposure prophylaxis for the prevention of HIV infection in the United StatesâĂŞ : A clinical practice guideline. CDC report Chambers, J. M. (
| |
[b6] via grobid |
Graphical Methods for Data Analysis. London: CRC Press
| |
[b7] via grobid |
Cohen, M. S., Chen, Y. Q., McCauley, M., Gamble, T., Hosseinipour, M. C., Kumarasamy, N., Fleming, T. R., Hakim, J. G., Kumwenda, J., Grinsztejn, B., Pilotto, J. H. S., Godbole, S. V., Mehendale, S., Chariyalertsak, S., Santos, B. R., Mayer, K. H., Ho man, I. F., Eshleman, S. H., Piwowar-Manning, E., Wang, L., Makhema, J., Mills, L. A., de Bruyn, G., Sanne, I., Eron, J., Gallant, J., Havlir, D., Swindells, S., Ribaudo, H., Elharrar, V., Burns, D., Taha, E. T., Nielsen-Saines, K., Celentano, S. & Essex, M. ( ). Prevention of HIV-infection with early antiretroviral therapy. New England Journal of Medicine, ( ), -
| |
[b8] via fuzzy |
A Call to Arms: Standards for Agent-Based Modeling and Simulation
Andrew Collins, Mikel Petty, Daniele Vernon-Bido, Solomon Sherfey 2015 Journal of Artificial Societies and Social Simulation doi:10.18564/jasss.2838 |
web.archive.org [PDF]
|
[b9] via grobid |
Donkin, E., Dennis, P., Ustalakov, A., Warren, J. & Clare, A. ( ). Replicating complex agent based models, a formidable task. Environmental Modelling & So ware, , - Edmonds, B. & Hales, D. (
| |
[b10] via grobid |
Replication, replication and replication: Some hard lessons from model align- ment. Journal of Artificial Societies and Social Simulation, ( ),
| |
[b11] via grobid |
Epstein, J. M. ( ). Zones of cooperation in demographic prisoner's dilemma. Complexity, ( ), -
| |
[b12] via grobid |
Epstein, J. M. ( ). Modelling to contain pandemics. Nature, (
| |
[b13] via grobid |
Fachada, N. & Rosa, A. C. ( ). Assessing the feasibility of OpenCL CPU implementations for agent-based simulations. In Proceedings of the th International Workshop on OpenCL (p. ). ACM
| |
[b14] via grobid |
Goodreau, S. M., Carnegie, N. B., Vittingho , E., Lama, J. R., Fuchs, J. D., Sanchez, J. & Buchbinder, S. P. ( ).
| |
[b15] via grobid |
Can male circumcision have an impact on the HIV epidemic in men who have sex with men? PLoS ONE, ( ), e
| |
[b16] via grobid |
Goodreau, S. M., Carnegie, N. B., Vittingho , E., Lama, J. R., Sanchez, J., Grinsztejn, B., Koblin, B. A., Mayer, K. H. & Burchbinder, S. P. ( ). What drives the US and Peruvian HIV epidemics in men who have sex with men (MSM)? PLoS ONE, ( ), e
| |
[b17] via grobid |
Grimm, V., Augusiak, J., Focks, A., Frank, B. M., Gabsi, F., Johnston, A. S. A., Meli, M., Liu, C., Martin, B. T., Thorbek, P. & Railsback, S. F. ( ). Towards better modelling and decision support: Documenting model develop- ment, testing, and analysis using TRACE. Ecological Modelling, , -
| |
[b18] via grobid |
Grimm, V., Berger, U., Bastiansen, F., Eliassen, S., Ginot, V., Giske, J., Goss-Custard, J., Grand, T., Heinz, S. K., Huse, G., Huth, A., Jepsen, J. U., Jørgensen, C., Mooij, W. M., Müller, B., Pe'er, G., Piou, C., Railsback, S. F., Robbins, A. M., Robbins, M. M., Rossmanith, E., Rüger, N., Strand, E., Souissi, S., Stillman, R. A., Vabø, R., Visser, U. & DeAngelis, D. L. ( ). A standard protocol for describing individual-based and agent-based models. Ecological Modelling, ( -), -
| |
[b19] via grobid |
Grimm, V., Berger, U., DeAngelis, D. L., Polhill, J. G., Giske, J. & Railsback, S. F. G. ( ). The ODD protocol: A review and first update. Ecological Modelling, ( ), -
| |
[b20] via grobid |
Grimm, V., Polhill, G. & Touza, J. ( ). Documenting social simulation models: The ODD protocol as a standard.
| |
[b21] via grobid |
In B. Edmonds & R. Meyer (Eds.), Simulating Social Complexity: A Handbook, (pp. - ). Cham: Springer International
| |
[b22] via grobid |
Grimm, V., Revilla, E., Berger, U., Jeltsch, F., Mooij, W. M., Railsback, S. F., Thulke, H. H., Weiner, J., Wiegand, T. & DeAngelis, D. L. ( ). Pattern-oriented modeling of agent-based complex systems: Lessons from ecology. Science, ( ), -
| |
[b23] via grobid |
Gunaratne, C. & Garibay, I. ( ). Alternate social theory discovery using genetic programming: Towards better understanding the artificial Anasazi. GECCO' Proceedings of the Genetic and Evolutionary Computation Conference Hayes, I. J. ( ). Specification directed module testing. IEEE Transactions on So ware Engineering, ( ), -
| |
[b24] via grobid |
Hernández-Romieu, A. C., Sullivan, P. S., Rothenberg, R., Grey, J., Luisi, N., Kelley, C. F. & Rosenberg, E. S. ( ).
| |
[b25] via grobid |
Heterogeneity of HIV prevalence among the sexual networks of black and white men who have sex with men in Atlanta: Illuminating a mechanism for increased HIV risk for young black men who have sex with men. Sexually Transmitted Diseases, ( ), -
| |
[b26] via grobid |
Hjorth, A., Vermeer, W. & Wilensky, U. ( ). The NetLogo HIV spread model exploring impact of PrEP indication guidelines. (Version . . ). CoMSES Computational Model Library. Retrieved from: https://www.comses. net/codebases/d3d45a7e-24a4-42e9-a44b
| |
[b27] via grobid |
Hughes, J. P., Lingappa, J. R., Celum, C., Baeten, J. M., Wald, A., Farquhar, C., Kilembe, W., Magaret, A., de Bruyn, G., Kiarie, J., Inambao, M., Celum, C. & Partners in Prevention HSV/HIV Transmission Study Team ( ). De- terminants of per-coital-act HIV-infectivity among african HIV--Serodiscordant couples. The Journal of In- fectious Diseases, ( ), -
| |
[b28] via fuzzy |
Understanding Artificial Anasazi
Marco A. Janssen 2009 Journal of Artificial Societies and Social Simulation dblp:journals/jasss/Janssen09 | |
[b29] via fuzzy |
EpiModel: An R Package for Mathematical Modeling of Infectious Disease over Networks
Samuel M. Jenness, Steven M. Goodreau, Martina Morris 2018 Journal of Statistical Software doi:10.18637/jss.v084.i08 pmcid:PMC5931789 pmid:29731699 |
web.archive.org [PDF]
|
|