Colombian haplotypes of the Gaucher disease-causing N370S mutation may originate from a possible common ancestral haplotype
Los haplotipos colombianos de la mutación N370S causante de la enfermedad de Gaucher pueden provenir de un haplotipo ancestral común release_exhgctqik5gxzjpbxmcvp3zybq

by Ricardo Wilches, Hugo Vega, Olga Echeverri, Luis Alejandro Barrera

Published in Biomédica: revista del Instituto Nacional de Salud .

Volume 26, Issue 3 p434-41 (2006)

Abstract

Gaucher disease is a pan-ethnic condition characterised by glucosylceramide accumulation in macrophages due to glucocerebrosidase deficiency. Its gene, GBA, has been mapped to 1q21 and mutation N370S is the main cause of the disease in western populations, including Colombia. To asses the degree of association between N370S mutation and the alleles of five microsatellites near the mutation site in the GBA locus in nine Colombian Gaucher patients, from the Cundinamarca-Boyacá region. DNA from patients bearing the N370S mutation, their closest relatives, and 30 controls was taken to PCR-amplify the markers: D1S305, D1S2624, DIS2777, ITG6.6.2 and 5GC3.2. Allele frequencies were calculated, haplotypes inferred and linkage disequilibrium levels between marker alleles and N370S were also estimated. Eleven N370S chromosomes were obtained. A consensus N370S haplotype consisting of the alleles: 222-314-260-301-172 (base pairs) was identified. Each allele corresponding to markers 5GC3.2, ITG6.6.2, D1S277, D1S2624 and D1S305, respectively. There was statistically significant linkage disequilibrium between the alleles of 222, 314, 260, 301 base pairs and the N370S mutation. A conserved fraction of the haplotypes suggests that N370S may be present among patients and stem from a single ancestral chromosome for which the ethnic origin is still unclear.
In text/plain format

Archived Files and Locations

application/pdf  32.0 kB
file_fdwwx2il6vev3di5wdtpjim4eu
web.archive.org (webarchive)
www.scielo.org.co (web)
Read Archived PDF
Archived
Type  article-journal
Stage   published
Year   2006
Language   es ?
PubMed  17176007
Container Metadata
Open Access Publication
In DOAJ
In Keepers Registery
ISSN-L:  0120-4157
Work Entity
access all versions, variants, and formats of this works (eg, pre-prints)
Catalog Record
Revision: af001e96-be30-4a2d-afe0-353ad48868ff
API URL: JSON